Heinz Sklenar: search on Z-Library

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1

A numerical method for the solution of the one-dimensional Schrödinger equation

Journal:

Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta)

Year:

1974

Language:

english

File:

PDF, 590 KB

english, 1974

2

Describing protein structure: A general algorithm yielding complete helicoidal parameters and a unique overall axis

Heinz Sklenar, Catherine Etchebest, Richard Lavery

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1989

Language:

english

File:

PDF, 1003 KB

english, 1989

3

Force field based conformational analysis of RNA structural motifs: GNRA tetraloops and their pyrimidine relatives

Alexandra Maier, Heinz Sklenar, Herbert F. Kratky, Alexander Renner, Peter Schuster

Journal:

European Biophysics Journal

Year:

1999

Language:

english

File:

PDF, 247 KB

english, 1999

4

Conformational analysis of single-base bulges in A-form DNA and RNA using a hierarchical approach and energetic evaluation with a continuum solvent model

Martin Zacharias, Heinz Sklenar

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 311 KB

english, 1999

5

Combining structural analysis of DNA with search routines for the detection of transcription regulatory elements

Karas, Holger, Knüppel, Rainer, Schulz, Wolfgang, Sklenar, Heinz, Wingender, Edgar

Journal:

Year:

1996

Language:

english

File:

PDF, 524 KB

english, 1996

6

Structural and Energetic Origins of Sequence-Specific DNA Bending: Monte Carlo Simulations of Papillomavirus E2-DNA Binding Sites

Remo Rohs, Heinz Sklenar, Zippora Shakked

Journal:

Year:

2005

Language:

english

File:

PDF, 706 KB

english, 2005

7

NMR Studies and Restrained-Molecular-Dynamics Calculations of a Long A+T-Rich Stretch in DNA : Effects of Phosphate Charge and Solvent Approximations

Mikael Leijon, Janusz Zdunek, Hartmut Fritzsche, Heinz Sklenar, Astrid Gräslund

Journal:

Year:

1995

Language:

english

File:

PDF, 1.93 MB

english, 1995

8

Molecular structure–biological activity relationships on the basis of quantum-chemical calculations

Heinz Sklenar, Joachim Jäger

Journal:

International Journal of Quantum Chemistry

Year:

1979

Language:

english

File:

PDF, 882 KB

english, 1979

9

Conformation of d(GGGATCCC) 2 in crystals and in solution studied by X-ray diffraction, Raman spectroscopy and molecular modelling

Fabian, Heinz, Hölzer, Wolfgang, Heinemann, Udo, Sklenar, Heinz, Welfle, Heinz

Journal:

Nucleic Acids Research

Year:

1993

Language:

english

File:

PDF, 2.34 MB

english, 1993

10

A standard reference frame for the description of nucleic acid base-pair geometry

Wilma K Olson, Manju Bansal, Stephen K Burley, Richard E Dickerson, Mark Gerstein, Stephen C Harvey, Udo Heinemann, Xiang-Jun Lu, Stephen Neidle, Zippora Shakked, Heinz Sklenar, Masashi Suzuki, Chang-

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 214 KB

english, 2001

11

The Flexibility of the Nucleic Acids: (II) The Calculation of Internal Energy and Applications to Mononucleotide Repeat DNA

Lavery, Richard, Sklenar, Heinz, Zakrzewska, Krystyna, Pullman, Bernard

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1986

Language:

english

File:

PDF, 1.11 MB

english, 1986

12

Atomistic Monte Carlo Simulation of Lipid Membranes

Wüstner, Daniel, Sklenar, Heinz

Journal:

International Journal of Molecular Sciences

Year:

2014

Language:

english

File:

PDF, 1.50 MB

english, 2014

13

Methylene Blue Binding to DNA with Alternating GC Base Sequence: A Modeling Study

Rohs, Remo, Sklenar, Heinz, Lavery, Richard, Röder, Beate

Journal:

Journal of the American Chemical Society

Year:

2000

Language:

english

File:

PDF, 123 KB

english, 2000

14

An ab initio study of the binding of N2 to Na+ and K+

Alberte Pullman, Heinz Sklenar, Shoba Ranganathan

Journal:

Chemical Physics Letters

Year:

1984

Language:

english

File:

PDF, 394 KB

english, 1984

15

Conformational and helicoidal analysis of the molecular dynamics of proteins: “Curves,” dials and windows for a 50 psec dynamic trajectory of BPTI

S. Swaminathan, G. Ravishanker, Dr. David L. Beveridge, Richard Lavery, Catherine Etchebest, Heinz Sklenar

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1990

Language:

english

File:

PDF, 1.11 MB

english, 1990

16

Harmonic modes as variables to approximately account for receptor flexibility in ligand-receptor docking simulations: Application to DNA minor groove ligand complex

Zacharias, Martin, Sklenar, Heinz

Journal:

Journal of Computational Chemistry

Year:

1999

Language:

english

File:

PDF, 325 KB

english, 1999

17

Using internal and collective variables in Monte Carlo simulations of nucleic acid structures: Chain breakage/closure algorithm and associated Jacobians

Heinz Sklenar, Daniel Wüstner, Remo Rohs

Journal:

Journal of Computational Chemistry

Year:

2006

Language:

english

File:

PDF, 170 KB

english, 2006

18

Molecular Dynamics Simulations of the 136 Unique Tetranucleotide Sequences of DNA Oligonucleotides. II: Sequence Context Effects on the Dynamical Structures of the 10 Unique Dinucleotide Steps

Dixit, Surjit B., Beveridge, David L., Case, David A., Cheatham, Thomas E., Giudice, Emmanuel, Lankas, Filip, Lavery, Richard, Maddocks, John H., Osman, Roman, Sklenar, Heinz, Thayer, Kelly M., Varnai

Journal:

Biophysical Journal

Year:

2005

Language:

english

File:

PDF, 780 KB

english, 2005

19

Methylene Blue Binding to DNA with Alternating AT Base Sequence: Minor Groove Binding is Favored over Intercalation

Rohs, Remo, Sklenar, Heinz

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2004

Language:

english

File:

PDF, 715 KB

english, 2004

20

The structure of the left-handed antiparallel amylose double helix: Theoretical studies

Wolfgang Schulz, Heinz Sklenar, Winfried Hinrichs, Wolfram Saenger

Journal:

Year:

1993

Language:

english

File:

PDF, 864 KB

english, 1993

21

The Flexibility of the Nucleic Acids: (III) The Interaction of an Aliphatic Diamine, Putrescine, with Flexible B-DNA

Lavery, Richard, Sklenar, Heinz, Pullman, Bernard

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1986

Language:

english

File:

PDF, 836 KB

english, 1986

22

Solvation Oscillations and Excited-State Dynamics of 2-Amino- and 2-Hydroxy-7-nitrofluorene and Its 2‘-deoxyriboside

Karunakaran, Venugopal, Pfaffe, Matthias, Ioffe, Ilya, Senyushkina, Tamara, Kovalenko, Sergey A., Mahrwald, Rainer, Fartzdinov, Vadim, Sklenar, Heinz, Ernsting, Nikolaus P.

Journal:

Journal of Physical Chemistry A

Year:

2008

Language:

english

File:

PDF, 988 KB

english, 2008

23

Defining the Structure of Irregular Nucleic Acids: Conventions and Principles

Lavery, Richard, Sklenar, Heinz

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1989

Language:

english

File:

PDF, 647 KB

english, 1989

24

The Definition of Generalized Helicoidal Parameters and of Axis Curvature for Irregular Nucleic Acids

Lavery, Richard, Sklenar, Heinz

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1988

Language:

english

File:

PDF, 1.30 MB

english, 1988

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